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Assessment Run B2 2006
 

HER-2 FISH & CISH

The slide to be analysed for HER-2 amplification was identical with the one for HER-2 IHC comprising:

HER-2 protein status* HER-2 gene status*

1. Cell line JIMT-1

2+ Amplified        (7,0 - 11,0)        

2. Cell line MDA-453

2+ Amplified        (2,2 - 3,1)**

3. Cell line MCF-7

1+ Non-amplified (0,8 - 1,3)

4. Cell line BT474

3+ Amplified        (4,0 - 9,7)

5. Breast ductal carcinoma

0 Non-amplified (1,0 - 1,2)***

6. Breast ductal carcinoma

1+ Non-amplified (1,1 - 1,4)

7. Breast ductal carcinoma

3+ Amplified        (5,5 - 13,8)

8. Breast ductal carcinoma

3+ Amplified        (3,6 - 8,5)     

* as defined in four reference laboratories.

** Most labs. found amplification suggesting a mix-up, the specimen was excluded.

*** In most slides carcinoma in situ dominated, the specimen was excluded.

 

28 laboratories participated in the assessment. 21 submitted FISH and 7 CISH stains. As shown in Fig. 1 (data only available for 17), when only looking at the scoring amplified v. non-amplified, the there were two false positives in cell line MCF-7, one borderline in cell line BT474 and one false negative in carcinoma no. 8. In total, 97 of 102 scores were concordant (95%). In reading CISH in 40 assays available from the 7 labs., 38 were concordant (95%).

The laboratories participating submitted their protocols. However, it became clear that an analysis of the protocols and comparison with the staining results were not feasible in the current setting, and future HER-2 FISH should probably be based on the participants own reading.

Conclusion

Even though the material is rather small and technical problems partly hampered the analysis, it appears that both FISH and CISH give high concordance rates.

Fig. 1. Concordance table for HER-2 FISH described in the text.

Fig. 2. Virtual FISH slide of 3 x 3 images and 10 focus layers. No DAPI counterstain (courtesy of Prof. Jorma Isola).

MV/SN/AS

Last update 07-12-2006